Module configs

PMPNN Core Config and Builder API

This module provides configuration structs and builders for the PMPNN protein design system.

Core Configuration Types

• ModelTypes - Enum of supported model architectures
• ProteinMPNNConfig - Core model parameters
• AABiasConfig - Amino acid biasing controls
• LigandMPNNConfig - LigandMPNN specific settings
• MembraneMPNNConfig - MembraneMPNN specific settings
• MultiPDBConfig - Multi-PDB mode configuration
• ResidueControl - Residue-level design controls
• RunConfig - Runtime execution parameters// Core Configs for handling CLI ARGs and Model Params

Structs

• AABiasConfig
  Amino Acid Biasing
• LigandMPNNConfig
  LigandMPNN Specific
• MPNNExecConfig
  Responsible for taking CLI args and returning the Features and Model
• MembraneMPNNConfig
  Membrane MPNN Specific
• MultiPDBConfig
  Multi-PDB Related
• ProteinMPNNConfig
• ResidueControl
• RunConfig

Enums

• ModelTypes