phylocanvas

An html widget wrapper of the phylocanvas.js JS library.

phylocanvas(tree, treetype = "rectangular", nodestyles = NULL,
  nodesize = 30, textsize = 30, linewidth = 3, showlabels = TRUE,
  alignlabels = FALSE, showhistory = FALSE, showcontextmenu = TRUE,
  showscalebar = FALSE, width = NULL, height = NULL, elementId = NULL)

Arguments

tree	Required. Newick string of a phyloseq tree, phylo class object, phylo4 class object,, or path to newick-containing file.
treetype	Optional. Default "rectangular". Can be one of "rectengular", "circular", "hierarchical", "diagonal", or "radial".
nodestyles	Optional. Default NULL. Let nodes b stylized.
nodesize	Optional. Default 30. Global nodesize.
textsize	Optional. Default 30. Global textsize.
linewidth	Optional. Default 3. Global linewidth.
showlabels	Optional. Default TRUE. Whether to show labels.
alignlabels	Optional. Default FALSE. Whether to align node labels
showhistory	Optional. Default FALSE. Whether to use/show the history plugin.
showcontextmenu	Optional. Default TRUE. Whether to use/show the mouse context menu.
showscalebar	Optional. Default FALSE. Whether to use/show the scalebar.
width	Optional. Default NULL. HTMLWidget width
height	Optional. Default NULL. HTMLWidget width
elementId	Optional. Default NULL. HTMLWidget ID